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			1147 строки
		
	
	
		
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			Plaintext
		
	
	
	
	
	
			
		
		
	
	
			1147 строки
		
	
	
		
			30 KiB
		
	
	
	
		
			Plaintext
		
	
	
	
	
	
{
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 "cells": [
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  {
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   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
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   "source": [
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    "# Objects recognition"
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   ]
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  },
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  {
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   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
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   "source": [
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    "This notebooks shows how to detect objects quickly using [cvlib](https://github.com/arunponnusamy/cvlib) and the [YOLOv4](https://github.com/AlexeyAB/darknet) model. This library detects faces, people, and several inanimate objects; we currently have restricted the output to person, bicycle, car, motorcycle, airplane, bus, train, truck, boat, traffic light, cell phone.\n",
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    "\n",
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    "The first cell is only run on google colab and installs the [ammico](https://github.com/ssciwr/AMMICO) package.\n",
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    "\n",
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    "After that, we can import `ammico` and read in the files given a folder path."
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   ]
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  },
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  {
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   "cell_type": "code",
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   "execution_count": 1,
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   "metadata": {
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    "execution": {
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     "iopub.execute_input": "2023-06-22T12:10:36.189368Z",
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     "iopub.status.busy": "2023-06-22T12:10:36.188888Z",
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     "iopub.status.idle": "2023-06-22T12:10:36.198660Z",
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     "shell.execute_reply": "2023-06-22T12:10:36.198055Z"
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    }
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   },
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   "outputs": [],
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   "source": [
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    "# if running on google colab\n",
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    "# flake8-noqa-cell\n",
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    "import os\n",
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    "\n",
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    "if \"google.colab\" in str(get_ipython()):\n",
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    "    # update python version\n",
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    "    # install setuptools\n",
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    "    # %pip install setuptools==61 -qqq\n",
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    "    # install ammico\n",
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    "    %pip install git+https://github.com/ssciwr/ammico.git -qqq\n",
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    "    # mount google drive for data and API key\n",
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    "    from google.colab import drive\n",
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    "\n",
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    "    drive.mount(\"/content/drive\")"
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   ]
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  },
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  {
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   "cell_type": "code",
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   "execution_count": 2,
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   "metadata": {
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    "execution": {
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     "iopub.execute_input": "2023-06-22T12:10:36.201796Z",
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     "iopub.status.busy": "2023-06-22T12:10:36.201360Z",
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     "iopub.status.idle": "2023-06-22T12:10:51.385780Z",
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     "shell.execute_reply": "2023-06-22T12:10:51.384632Z"
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    }
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   },
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   "outputs": [],
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   "source": [
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    "import ammico\n",
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    "from ammico import utils as mutils\n",
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    "from ammico import display as mdisplay\n",
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    "import ammico.objects as ob"
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   ]
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  },
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  {
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   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
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   "source": [
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    "Set an image path as input file path."
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   ]
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  },
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  {
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   "cell_type": "code",
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   "execution_count": 3,
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   "metadata": {
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    "execution": {
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     "iopub.execute_input": "2023-06-22T12:10:51.390009Z",
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     "iopub.status.busy": "2023-06-22T12:10:51.389235Z",
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     "iopub.status.idle": "2023-06-22T12:10:51.393571Z",
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     "shell.execute_reply": "2023-06-22T12:10:51.392841Z"
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    }
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   },
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   "outputs": [],
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   "source": [
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    "# Here you need to provide the path to your google drive folder\n",
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    "# or local folder containing the images\n",
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    "images = mutils.find_files(\n",
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    "    path=\"data/\",\n",
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    "    limit=10,\n",
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    ")"
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   ]
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  },
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  {
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   "cell_type": "code",
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   "execution_count": 4,
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   "metadata": {
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    "execution": {
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     "iopub.execute_input": "2023-06-22T12:10:51.396653Z",
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     "iopub.status.busy": "2023-06-22T12:10:51.396213Z",
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     "iopub.status.idle": "2023-06-22T12:10:51.399496Z",
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     "shell.execute_reply": "2023-06-22T12:10:51.398817Z"
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    }
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   },
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   "outputs": [],
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   "source": [
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    "mydict = mutils.initialize_dict(images)"
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   ]
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  },
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  {
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   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
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   "source": [
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    "## Detect objects and directly write to csv\n",
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    "You can directly carry out the analysis and export the result into a csv. This may take a while depending on how many images you have loaded."
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   ]
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  },
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  {
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   "cell_type": "code",
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   "execution_count": 5,
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   "metadata": {
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    "execution": {
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     "iopub.execute_input": "2023-06-22T12:10:51.402641Z",
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     "iopub.status.busy": "2023-06-22T12:10:51.402213Z",
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     "iopub.status.idle": "2023-06-22T12:10:59.134144Z",
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     "shell.execute_reply": "2023-06-22T12:10:59.133272Z"
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    }
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   },
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   "outputs": [
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    {
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     "name": "stderr",
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     "output_type": "stream",
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     "text": [
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      "  0% |                                                                        |\r"
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    {
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     "name": "stdout",
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     "output_type": "stream",
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     "text": [
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      "Downloading yolov4.cfg from https://raw.githubusercontent.com/AlexeyAB/darknet/master/cfg/yolov4.cfg\n",
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      "Downloading yolov4.weights from https://github.com/AlexeyAB/darknet/releases/download/darknet_yolo_v3_optimal/yolov4.weights\n"
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     ]
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      "  2% |#                                                                       |\r"
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     "name": "stdout",
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     "output_type": "stream",
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     "text": [
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      "Downloading yolov3_classes.txt from https://github.com/arunponnusamy/object-detection-opencv/raw/master/yolov3.txt\n"
 | 
						|
     ]
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    },
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   ],
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   "source": [
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    "for key in mydict:\n",
 | 
						|
    "    mydict[key] = ob.ObjectDetector(mydict[key]).analyse_image()"
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   ]
 | 
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  },
 | 
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  {
 | 
						|
   "attachments": {},
 | 
						|
   "cell_type": "markdown",
 | 
						|
   "metadata": {},
 | 
						|
   "source": [
 | 
						|
    "Convert the dictionary of dictionarys into a dictionary with lists:"
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
 | 
						|
   "cell_type": "code",
 | 
						|
   "execution_count": 6,
 | 
						|
   "metadata": {
 | 
						|
    "execution": {
 | 
						|
     "iopub.execute_input": "2023-06-22T12:10:59.137860Z",
 | 
						|
     "iopub.status.busy": "2023-06-22T12:10:59.137598Z",
 | 
						|
     "iopub.status.idle": "2023-06-22T12:10:59.141670Z",
 | 
						|
     "shell.execute_reply": "2023-06-22T12:10:59.140991Z"
 | 
						|
    }
 | 
						|
   },
 | 
						|
   "outputs": [],
 | 
						|
   "source": [
 | 
						|
    "outdict = mutils.append_data_to_dict(mydict)\n",
 | 
						|
    "df = mutils.dump_df(outdict)"
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
 | 
						|
   "attachments": {},
 | 
						|
   "cell_type": "markdown",
 | 
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   "metadata": {},
 | 
						|
   "source": [
 | 
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    "Check the dataframe:"
 | 
						|
   ]
 | 
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  },
 | 
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  {
 | 
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   "cell_type": "code",
 | 
						|
   "execution_count": 7,
 | 
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   "metadata": {
 | 
						|
    "execution": {
 | 
						|
     "iopub.execute_input": "2023-06-22T12:10:59.145413Z",
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						|
     "iopub.status.busy": "2023-06-22T12:10:59.145185Z",
 | 
						|
     "iopub.status.idle": "2023-06-22T12:10:59.160111Z",
 | 
						|
     "shell.execute_reply": "2023-06-22T12:10:59.159431Z"
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						|
    }
 | 
						|
   },
 | 
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   "outputs": [
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						|
    {
 | 
						|
     "data": {
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						|
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       "  <thead>\n",
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       "    <tr style=\"text-align: right;\">\n",
 | 
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       "      <th></th>\n",
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       "      <th>filename</th>\n",
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       "      <th>person</th>\n",
 | 
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       "      <th>bicycle</th>\n",
 | 
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       "      <th>car</th>\n",
 | 
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       "      <th>motorcycle</th>\n",
 | 
						|
       "      <th>airplane</th>\n",
 | 
						|
       "      <th>bus</th>\n",
 | 
						|
       "      <th>train</th>\n",
 | 
						|
       "      <th>truck</th>\n",
 | 
						|
       "      <th>boat</th>\n",
 | 
						|
       "      <th>traffic light</th>\n",
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						|
       "      <th>cell phone</th>\n",
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						|
       "    </tr>\n",
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       "  </thead>\n",
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       "  <tbody>\n",
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       "    <tr>\n",
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       "      <th>0</th>\n",
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						|
       "      <td>data/106349S_por.png</td>\n",
 | 
						|
       "      <td>yes</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>yes</td>\n",
 | 
						|
       "    </tr>\n",
 | 
						|
       "    <tr>\n",
 | 
						|
       "      <th>1</th>\n",
 | 
						|
       "      <td>data/102141_2_eng.png</td>\n",
 | 
						|
       "      <td>yes</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "    </tr>\n",
 | 
						|
       "    <tr>\n",
 | 
						|
       "      <th>2</th>\n",
 | 
						|
       "      <td>data/102730_eng.png</td>\n",
 | 
						|
       "      <td>yes</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>yes</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "      <td>no</td>\n",
 | 
						|
       "    </tr>\n",
 | 
						|
       "  </tbody>\n",
 | 
						|
       "</table>\n",
 | 
						|
       "</div>"
 | 
						|
      ],
 | 
						|
      "text/plain": [
 | 
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       "                filename person bicycle car motorcycle airplane bus train  \\\n",
 | 
						|
       "0   data/106349S_por.png    yes      no  no         no       no  no    no   \n",
 | 
						|
       "1  data/102141_2_eng.png    yes      no  no         no       no  no    no   \n",
 | 
						|
       "2    data/102730_eng.png    yes      no  no         no       no  no    no   \n",
 | 
						|
       "\n",
 | 
						|
       "  truck boat traffic light cell phone  \n",
 | 
						|
       "0    no   no            no        yes  \n",
 | 
						|
       "1    no   no            no         no  \n",
 | 
						|
       "2   yes   no            no         no  "
 | 
						|
      ]
 | 
						|
     },
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						|
     "execution_count": 7,
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     "metadata": {},
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     "output_type": "execute_result"
 | 
						|
    }
 | 
						|
   ],
 | 
						|
   "source": [
 | 
						|
    "df.head(10)"
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
 | 
						|
   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
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   "source": [
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    "Write the csv file:"
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
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						|
   "cell_type": "code",
 | 
						|
   "execution_count": 8,
 | 
						|
   "metadata": {
 | 
						|
    "execution": {
 | 
						|
     "iopub.execute_input": "2023-06-22T12:10:59.163212Z",
 | 
						|
     "iopub.status.busy": "2023-06-22T12:10:59.162992Z",
 | 
						|
     "iopub.status.idle": "2023-06-22T12:10:59.168274Z",
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						|
     "shell.execute_reply": "2023-06-22T12:10:59.167142Z"
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    }
 | 
						|
   },
 | 
						|
   "outputs": [],
 | 
						|
   "source": [
 | 
						|
    "df.to_csv(\"data_out.csv\")"
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
 | 
						|
   "attachments": {},
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   "cell_type": "markdown",
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   "metadata": {},
 | 
						|
   "source": [
 | 
						|
    "## Manually inspect what was detected\n",
 | 
						|
    "\n",
 | 
						|
    "To check the analysis, you can inspect the analyzed elements here. Loading the results takes a moment, so please be patient. If you are sure of what you are doing, you can directly export a csv file in the step above.\n",
 | 
						|
    "Here, we display the object detection results provided by the above library. Click on the tabs to see the results in the right sidebar. You may need to increment the `port` number if you are already running several notebook instances on the same server."
 | 
						|
   ]
 | 
						|
  },
 | 
						|
  {
 | 
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   "cell_type": "code",
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						|
   "execution_count": 9,
 | 
						|
   "metadata": {
 | 
						|
    "execution": {
 | 
						|
     "iopub.execute_input": "2023-06-22T12:10:59.171163Z",
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						|
     "iopub.status.busy": "2023-06-22T12:10:59.170943Z",
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     "iopub.status.idle": "2023-06-22T12:10:59.215888Z",
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     "shell.execute_reply": "2023-06-22T12:10:59.215227Z"
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    }
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   },
 | 
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   "outputs": [
 | 
						|
    {
 | 
						|
     "name": "stdout",
 | 
						|
     "output_type": "stream",
 | 
						|
     "text": [
 | 
						|
      "Dash is running on http://127.0.0.1:8056/\n",
 | 
						|
      "\n"
 | 
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     ]
 | 
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    },
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    {
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     "data": {
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      "text/html": [
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       "\n",
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       "        <iframe\n",
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       "            width=\"100%\"\n",
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       "            height=\"650\"\n",
 | 
						|
       "            src=\"http://127.0.0.1:8056/\"\n",
 | 
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       "            frameborder=\"0\"\n",
 | 
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       "            allowfullscreen\n",
 | 
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       "            \n",
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       "        ></iframe>\n",
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       "        "
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      ],
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      "text/plain": [
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       "<IPython.lib.display.IFrame at 0x7f11f40ab100>"
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						|
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						|
     "output_type": "display_data"
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						|
    }
 | 
						|
   ],
 | 
						|
   "source": [
 | 
						|
    "analysis_explorer = mdisplay.AnalysisExplorer(mydict, identify=\"objects\")\n",
 | 
						|
    "analysis_explorer.run_server(port=8056)"
 | 
						|
   ]
 | 
						|
  },
 | 
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  {
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   "cell_type": "code",
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